Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH20Q8N6Y1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 MIR346-201ENST00000362234 95 ntBASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 AL139400.1-201ENST00000366220 510 ntBASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 AP000842.3-202ENST00000569238 1080 ntBASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 AC073389.1-201ENST00000595595 795 ntBASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH20Q8N6Y1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
PCDH20Q8N6Y1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 AL031731.1-201ENST00000642131 2094 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 FAM58DP-201ENST00000428076 619 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 PRYP6-201ENST00000514804 343 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 AL138918.1-201ENST00000568306 659 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 LINC00628-201ENST00000628516 1289 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 AC078925.2-201ENST00000624013 1973 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 GPAA1P2-202ENST00000606848 1787 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 PCDHA1-201ENST00000378133 2726 ntBASIC16.76■□□□□ 0.27
PCDH20Q8N6Y1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH20Q8N6Y1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms