Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 AC009078.2-202ENST00000463353 338 ntBASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 AL645728.2-201ENST00000641974 660 ntBASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC83Q8IWF9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC83Q8IWF9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 AC093909.1-201ENST00000504731 1122 ntBASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 AC069224.1-201ENST00000566372 1715 ntBASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC83Q8IWF9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC83Q8IWF9 FER1L4-210ENST00000615531 5998 ntBASIC19.27■□□□□ 0.67
CCDC83Q8IWF9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC83Q8IWF9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC83Q8IWF9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC83Q8IWF9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC83Q8IWF9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC83Q8IWF9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms