Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NUDCD3Q8IVD9 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 PMS2P1-201ENST00000431037 1228 ntBASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 AC087163.2-201ENST00000457299 853 ntBASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 AC099336.1-202ENST00000602961 463 ntBASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 AL591684.3-201ENST00000605187 298 ntBASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.35■□□□□ 0.21
NUDCD3Q8IVD9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 NUS1P2-201ENST00000417358 873 ntBASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NUDCD3Q8IVD9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.33■□□□□ 0.21
NUDCD3Q8IVD9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.33■□□□□ 0.21
NUDCD3Q8IVD9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NUDCD3Q8IVD9 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NUDCD3Q8IVD9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NUDCD3Q8IVD9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.33■□□□□ 0.21
NUDCD3Q8IVD9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NUDCD3Q8IVD9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 PPT1-215ENST00000641471 2368 ntBASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 RCN1P1-201ENST00000400413 996 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms