Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 PDPK2P-202ENST00000562415 1191 ntBASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 AP002472.1-201ENST00000577490 586 ntBASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CHD1LQ86WJ1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 AC074386.1-202ENST00000463561 864 ntBASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 BX640515.1-201ENST00000617215 977 ntBASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 AC092865.6-201ENST00000642101 219 ntBASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CHD1LQ86WJ1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 AC068137.2-201ENST00000605408 478 ntBASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHD1LQ86WJ1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms