Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AP002414.2-201ENST00000591780 3365 ntBASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 TMPOP1-202ENST00000424642 1267 ntBASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AC092919.2-201ENST00000623631 1645 ntBASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AL139288.1-201ENST00000623748 933 ntBASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRTM1Q86UE6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 PI4KAP1-204ENST00000612579 1703 ntBASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
LRRTM1Q86UE6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 PCED1CP-201ENST00000419887 785 ntBASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 AC087641.1-201ENST00000557561 1021 ntBASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 AC004706.3-202ENST00000621574 984 ntBASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 SSR4P1-203ENST00000599569 2260 ntBASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 AC005622.1-201ENST00000636801 1703 ntBASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRTM1Q86UE6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms