Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AL513210.1-201ENST00000629608 234 ntBASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD3Q7Z3D4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 AC254562.1-201ENST00000417586 456 ntBASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 SNHG9-202ENST00000564014 471 ntBASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 AC027307.2-201ENST00000591252 911 ntBASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 AC005622.1-201ENST00000636801 1703 ntBASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD3Q7Z3D4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 AC004461.1-201ENST00000412461 403 ntBASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 AL592309.1-201ENST00000443127 649 ntBASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 AC093724.1-201ENST00000448659 1027 ntBASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 AC008267.7-201ENST00000624570 1194 ntBASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms