Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AC036164.1-201ENST00000570544 333 ntBASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AC233724.13-201ENST00000598383 410 ntBASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AL606495.2-201ENST00000605867 535 ntBASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 AC018665.1-201ENST00000622927 1362 ntBASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LYSMD4Q5XG99 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 HIST3H2BA-201ENST00000436555 524 ntBASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 AC245100.3-201ENST00000441281 285 ntBASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 USP32P1-208ENST00000506594 1164 ntBASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LYSMD4Q5XG99 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 PCGF3-213ENST00000620529 1899 ntBASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 AL162726.2-201ENST00000438986 1017 ntBASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 RN7SL399P-201ENST00000471648 279 ntBASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 RN7SL219P-201ENST00000582872 296 ntBASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 MIR4321-201ENST00000592276 80 ntBASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 AL136982.4-201ENST00000437689 1740 ntBASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms