Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTNNA1P35221 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNNA1P35221 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNNA1P35221 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CTNNA1P35221 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 RPS2P1-201ENST00000434010 821 ntBASIC17.37■□□□□ 0.37
CTNNA1P35221 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.37■□□□□ 0.37
CTNNA1P35221 OR7E14P-202ENST00000530490 1290 ntBASIC17.37■□□□□ 0.37
CTNNA1P35221 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.37■□□□□ 0.37
CTNNA1P35221 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNNA1P35221 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.37■□□□□ 0.37
CTNNA1P35221 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.37■□□□□ 0.37
CTNNA1P35221 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 AC010491.1-201ENST00000563101 2797 ntBASIC17.37■□□□□ 0.37
CTNNA1P35221 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNNA1P35221 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.37■□□□□ 0.37
CTNNA1P35221 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.37■□□□□ 0.37
CTNNA1P35221 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTNNA1P35221 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.37■□□□□ 0.37
CTNNA1P35221 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTNNA1P35221 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CTNNA1P35221 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.36■□□□□ 0.37
CTNNA1P35221 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.36■□□□□ 0.37
CTNNA1P35221 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTNNA1P35221 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CTNNA1P35221 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTNNA1P35221 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 IGHV3-65-201ENST00000523210 341 ntBASIC17.36■□□□□ 0.37
CTNNA1P35221 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.36■□□□□ 0.37
CTNNA1P35221 AC020765.3-201ENST00000613051 740 ntBASIC17.36■□□□□ 0.37
CTNNA1P35221 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.36■□□□□ 0.37
CTNNA1P35221 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.36■□□□□ 0.37
CTNNA1P35221 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTNNA1P35221 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.36■□□□□ 0.37
CTNNA1P35221 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNNA1P35221 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CTNNA1P35221 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNNA1P35221 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
CTNNA1P35221 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.35■□□□□ 0.37
CTNNA1P35221 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.35■□□□□ 0.37
CTNNA1P35221 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.35■□□□□ 0.37
CTNNA1P35221 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTNNA1P35221 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.35■□□□□ 0.37
CTNNA1P35221 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CTNNA1P35221 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.35■□□□□ 0.37
CTNNA1P35221 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms