Protein–RNA interactions for Protein: P30084

ECHS1, Enoyl-CoA hydratase, mitochondrial, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1P30084 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ECHS1P30084 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.78■□□□□ 0.28
ECHS1P30084 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ECHS1P30084 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.78■□□□□ 0.28
ECHS1P30084 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.78■□□□□ 0.28
ECHS1P30084 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.78■□□□□ 0.28
ECHS1P30084 AC087481.3-201ENST00000602886 1894 ntBASIC16.78■□□□□ 0.28
ECHS1P30084 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHS1P30084 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 AC006504.4-201ENST00000592118 1568 ntBASIC16.77■□□□□ 0.28
ECHS1P30084 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.77■□□□□ 0.28
ECHS1P30084 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 AC112693.3-201ENST00000624819 1983 ntBASIC16.77■□□□□ 0.28
ECHS1P30084 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
ECHS1P30084 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
ECHS1P30084 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.77■□□□□ 0.28
ECHS1P30084 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.77■□□□□ 0.28
ECHS1P30084 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
ECHS1P30084 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
ECHS1P30084 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
ECHS1P30084 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.77■□□□□ 0.28
ECHS1P30084 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.77■□□□□ 0.28
ECHS1P30084 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.77■□□□□ 0.28
ECHS1P30084 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.77■□□□□ 0.28
ECHS1P30084 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.77■□□□□ 0.28
ECHS1P30084 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.77■□□□□ 0.28
ECHS1P30084 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 AP001350.2-201ENST00000625104 1094 ntBASIC16.77■□□□□ 0.28
ECHS1P30084 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ECHS1P30084 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ECHS1P30084 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ECHS1P30084 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.77■□□□□ 0.27
ECHS1P30084 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ECHS1P30084 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ECHS1P30084 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ECHS1P30084 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ECHS1P30084 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.77■□□□□ 0.27
ECHS1P30084 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ECHS1P30084 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.77■□□□□ 0.27
ECHS1P30084 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
ECHS1P30084 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ECHS1P30084 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ECHS1P30084 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ECHS1P30084 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ECHS1P30084 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
ECHS1P30084 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ECHS1P30084 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.76■□□□□ 0.27
ECHS1P30084 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.76■□□□□ 0.27
ECHS1P30084 ELK2BP-201ENST00000415014 1224 ntBASIC16.76■□□□□ 0.27
ECHS1P30084 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.76■□□□□ 0.27
ECHS1P30084 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.76■□□□□ 0.27
ECHS1P30084 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.76■□□□□ 0.27
ECHS1P30084 AL160237.2-201ENST00000556165 472 ntBASIC16.76■□□□□ 0.27
ECHS1P30084 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ECHS1P30084 AC139887.3-201ENST00000568585 713 ntBASIC16.76■□□□□ 0.27
ECHS1P30084 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
ECHS1P30084 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ECHS1P30084 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.76■□□□□ 0.27
ECHS1P30084 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ECHS1P30084 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.76■□□□□ 0.27
ECHS1P30084 U82695.1-201ENST00000635752 1889 ntBASIC16.76■□□□□ 0.27
ECHS1P30084 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.75■□□□□ 0.27
ECHS1P30084 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHS1P30084 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHS1P30084 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.75■□□□□ 0.27
ECHS1P30084 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ECHS1P30084 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ECHS1P30084 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ECHS1P30084 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ECHS1P30084 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ECHS1P30084 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms