Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PTPN6P29350 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PTPN6P29350 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 AC126177.1-201ENST00000547829 2218 ntBASIC15.58■□□□□ 0.08
PTPN6P29350 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
PTPN6P29350 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.58■□□□□ 0.08
PTPN6P29350 CRYGEP-201ENST00000412192 528 ntBASIC15.58■□□□□ 0.08
PTPN6P29350 VN2R19P-201ENST00000442399 1052 ntBASIC15.58■□□□□ 0.08
PTPN6P29350 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 KRT18P3-201ENST00000451602 1288 ntBASIC15.58■□□□□ 0.08
PTPN6P29350 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.58■□□□□ 0.08
PTPN6P29350 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.58■□□□□ 0.08
PTPN6P29350 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.58■□□□□ 0.08
PTPN6P29350 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 AC064836.3-201ENST00000607928 673 ntBASIC15.58■□□□□ 0.08
PTPN6P29350 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.58■□□□□ 0.08
PTPN6P29350 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PTPN6P29350 AC103702.1-201ENST00000548801 2630 ntBASIC15.58■□□□□ 0.08
PTPN6P29350 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PTPN6P29350 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN6P29350 AL592424.1-201ENST00000563624 1536 ntBASIC15.58■□□□□ 0.08
PTPN6P29350 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PTPN6P29350 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.58■□□□□ 0.08
PTPN6P29350 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.57■□□□□ 0.08
PTPN6P29350 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.57■□□□□ 0.08
PTPN6P29350 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.57■□□□□ 0.08
PTPN6P29350 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PTPN6P29350 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.57■□□□□ 0.08
PTPN6P29350 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.57■□□□□ 0.08
PTPN6P29350 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
PTPN6P29350 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PTPN6P29350 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.57■□□□□ 0.08
PTPN6P29350 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.57■□□□□ 0.08
PTPN6P29350 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PTPN6P29350 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.57■□□□□ 0.08
PTPN6P29350 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 PMS2P7-201ENST00000506558 1336 ntBASIC15.57■□□□□ 0.08
PTPN6P29350 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.57■□□□□ 0.08
PTPN6P29350 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.57■□□□□ 0.08
PTPN6P29350 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.57■□□□□ 0.08
PTPN6P29350 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PTPN6P29350 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PTPN6P29350 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.57■□□□□ 0.08
PTPN6P29350 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PTPN6P29350 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.57■□□□□ 0.08
PTPN6P29350 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN6P29350 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PTPN6P29350 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN6P29350 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PTPN6P29350 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN6P29350 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PTPN6P29350 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN6P29350 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.56■□□□□ 0.08
PTPN6P29350 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
PTPN6P29350 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.56■□□□□ 0.08
PTPN6P29350 HCG4B-203ENST00000450128 991 ntBASIC15.56■□□□□ 0.08
PTPN6P29350 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTPN6P29350 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.56■□□□□ 0.08
PTPN6P29350 RNA5SP416-201ENST00000516838 111 ntBASIC15.56■□□□□ 0.08
PTPN6P29350 PGAM5P1-201ENST00000518923 814 ntBASIC15.56■□□□□ 0.08
PTPN6P29350 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN6P29350 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms