Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC21.09■□□□□ 0.97
MS4A1P11836 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.09■□□□□ 0.97
MS4A1P11836 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.09■□□□□ 0.97
MS4A1P11836 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 THTPA-204ENST00000554970 569 ntTSL 4 BASIC21.09■□□□□ 0.97
MS4A1P11836 THTPA-206ENST00000556015 535 ntTSL 3 BASIC21.09■□□□□ 0.97
MS4A1P11836 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.09■□□□□ 0.97
MS4A1P11836 AC010507.1-201ENST00000633895 436 ntBASIC21.09■□□□□ 0.97
MS4A1P11836 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MS4A1P11836 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
MS4A1P11836 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
MS4A1P11836 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
MS4A1P11836 AC023824.1-201ENST00000562945 2975 ntBASIC21.09■□□□□ 0.97
MS4A1P11836 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
MS4A1P11836 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.08■□□□□ 0.97
MS4A1P11836 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
MS4A1P11836 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.08■□□□□ 0.97
MS4A1P11836 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC21.08■□□□□ 0.97
MS4A1P11836 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.08■□□□□ 0.97
MS4A1P11836 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.08■□□□□ 0.97
MS4A1P11836 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.08■□□□□ 0.97
MS4A1P11836 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.08■□□□□ 0.97
MS4A1P11836 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.08■□□□□ 0.97
MS4A1P11836 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.08■□□□□ 0.97
MS4A1P11836 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 AC109635.5-201ENST00000533593 962 ntBASIC21.08■□□□□ 0.97
MS4A1P11836 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.08■□□□□ 0.97
MS4A1P11836 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.08■□□□□ 0.97
MS4A1P11836 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.08■□□□□ 0.97
MS4A1P11836 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.08■□□□□ 0.97
MS4A1P11836 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.08■□□□□ 0.97
MS4A1P11836 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.08■□□□□ 0.97
MS4A1P11836 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.08■□□□□ 0.97
MS4A1P11836 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
MS4A1P11836 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
MS4A1P11836 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
MS4A1P11836 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
MS4A1P11836 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC21.07■□□□□ 0.96
MS4A1P11836 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
MS4A1P11836 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 AC022532.1-201ENST00000624563 1728 ntBASIC21.07■□□□□ 0.96
MS4A1P11836 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC21.07■□□□□ 0.96
MS4A1P11836 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
MS4A1P11836 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC21.07■□□□□ 0.96
MS4A1P11836 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
MS4A1P11836 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
MS4A1P11836 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
MS4A1P11836 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.07■□□□□ 0.96
MS4A1P11836 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
MS4A1P11836 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.07■□□□□ 0.96
MS4A1P11836 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.07■□□□□ 0.96
MS4A1P11836 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.07■□□□□ 0.96
MS4A1P11836 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC21.07■□□□□ 0.96
MS4A1P11836 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MS4A1P11836 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
MS4A1P11836 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MS4A1P11836 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms