Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LTFP02788 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 FAM220BP-201ENST00000377689 816 ntBASIC17.12■□□□□ 0.33
LTFP02788 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.12■□□□□ 0.33
LTFP02788 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 METTL21AP1-201ENST00000438852 635 ntBASIC17.12■□□□□ 0.33
LTFP02788 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 HLA-J-203ENST00000494367 1087 ntBASIC17.12■□□□□ 0.33
LTFP02788 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
LTFP02788 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.12■□□□□ 0.33
LTFP02788 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.12■□□□□ 0.33
LTFP02788 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.12■□□□□ 0.33
LTFP02788 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 LINC00628-201ENST00000628516 1289 ntBASIC17.12■□□□□ 0.33
LTFP02788 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
LTFP02788 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 KRT18P28-201ENST00000453838 1332 ntBASIC17.12■□□□□ 0.33
LTFP02788 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LTFP02788 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.12■□□□□ 0.33
LTFP02788 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
LTFP02788 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.12■□□□□ 0.33
LTFP02788 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTFP02788 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LTFP02788 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LTFP02788 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LTFP02788 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 HLA-H-201ENST00000383620 1096 ntBASIC17.11■□□□□ 0.33
LTFP02788 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.11■□□□□ 0.33
LTFP02788 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LTFP02788 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.11■□□□□ 0.33
LTFP02788 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.11■□□□□ 0.33
LTFP02788 AC109322.1-201ENST00000524499 1264 ntBASIC17.11■□□□□ 0.33
LTFP02788 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.11■□□□□ 0.33
LTFP02788 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LTFP02788 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LTFP02788 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.11■□□□□ 0.33
LTFP02788 REXO1L8P-201ENST00000604378 1897 ntBASIC17.11■□□□□ 0.33
LTFP02788 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LTFP02788 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.11■□□□□ 0.33
LTFP02788 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTFP02788 AP3S2-216ENST00000617003 1561 ntBASIC17.11■□□□□ 0.33
LTFP02788 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LTFP02788 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LTFP02788 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LTFP02788 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
LTFP02788 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.1■□□□□ 0.33
LTFP02788 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.1■□□□□ 0.33
LTFP02788 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
LTFP02788 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LTFP02788 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.1■□□□□ 0.33
LTFP02788 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.1■□□□□ 0.33
LTFP02788 SPDYE14P-201ENST00000442619 822 ntBASIC17.1■□□□□ 0.33
LTFP02788 RNA5SP410-201ENST00000516285 106 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms