Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DQB1P01920 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 LINC00982-205ENST00000420957 435 ntBASIC14.19□□□□□ -0.14
HLA-DQB1P01920 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 AC011498.5-201ENST00000592027 486 ntBASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.19□□□□□ -0.14
HLA-DQB1P01920 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 GPAA1P2-202ENST00000606848 1787 ntBASIC14.19□□□□□ -0.14
HLA-DQB1P01920 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HLA-DQB1P01920 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 AC022616.7-201ENST00000525383 220 ntBASIC14.18□□□□□ -0.14
HLA-DQB1P01920 KRT8P26-201ENST00000534154 1276 ntBASIC14.18□□□□□ -0.14
HLA-DQB1P01920 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 LINC01238-205ENST00000567549 1107 ntBASIC14.18□□□□□ -0.14
HLA-DQB1P01920 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 AC139749.1-202ENST00000617529 3139 ntBASIC14.18□□□□□ -0.14
HLA-DQB1P01920 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DQB1P01920 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DQB1P01920 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms