Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 IGHV3-62-201ENST00000520057 340 ntBASIC17.35■□□□□ 0.37
ZBED1O96006 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.35■□□□□ 0.37
ZBED1O96006 AL138918.1-201ENST00000568306 659 ntBASIC17.35■□□□□ 0.37
ZBED1O96006 AC027307.2-201ENST00000591252 911 ntBASIC17.35■□□□□ 0.37
ZBED1O96006 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.35■□□□□ 0.37
ZBED1O96006 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.35■□□□□ 0.37
ZBED1O96006 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.35■□□□□ 0.37
ZBED1O96006 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ZBED1O96006 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZBED1O96006 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
ZBED1O96006 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ZBED1O96006 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
ZBED1O96006 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ZBED1O96006 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ZBED1O96006 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ZBED1O96006 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.35■□□□□ 0.37
ZBED1O96006 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZBED1O96006 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZBED1O96006 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.34■□□□□ 0.37
ZBED1O96006 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
ZBED1O96006 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.34■□□□□ 0.37
ZBED1O96006 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.34■□□□□ 0.37
ZBED1O96006 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZBED1O96006 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.34■□□□□ 0.37
ZBED1O96006 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.34■□□□□ 0.37
ZBED1O96006 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.34■□□□□ 0.37
ZBED1O96006 AC005237.2-201ENST00000434368 219 ntBASIC17.34■□□□□ 0.37
ZBED1O96006 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 KRT8P23-201ENST00000560090 1207 ntBASIC17.34■□□□□ 0.37
ZBED1O96006 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ZBED1O96006 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 AL662844.4-201ENST00000606367 2838 ntBASIC17.34■□□□□ 0.37
ZBED1O96006 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.34■□□□□ 0.37
ZBED1O96006 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZBED1O96006 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
ZBED1O96006 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
ZBED1O96006 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.34■□□□□ 0.37
ZBED1O96006 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.33■□□□□ 0.37
ZBED1O96006 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ZBED1O96006 PCGF3-213ENST00000620529 1899 ntBASIC17.33■□□□□ 0.37
ZBED1O96006 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
ZBED1O96006 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZBED1O96006 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.33■□□□□ 0.36
ZBED1O96006 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
ZBED1O96006 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.33■□□□□ 0.36
ZBED1O96006 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 AL627223.1-201ENST00000416693 442 ntBASIC17.33■□□□□ 0.36
ZBED1O96006 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.33■□□□□ 0.36
ZBED1O96006 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.33■□□□□ 0.36
ZBED1O96006 AC069335.1-201ENST00000489972 472 ntBASIC17.33■□□□□ 0.36
ZBED1O96006 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.33■□□□□ 0.36
ZBED1O96006 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.33■□□□□ 0.36
ZBED1O96006 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ZBED1O96006 DOC2GP-204ENST00000639052 2548 ntBASIC17.33■□□□□ 0.36
ZBED1O96006 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
ZBED1O96006 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms