Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
EDF1O60869 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.16■□□□□ 0.18
EDF1O60869 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
EDF1O60869 LINC01101-201ENST00000622953 1884 ntBASIC16.16■□□□□ 0.18
EDF1O60869 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EDF1O60869 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EDF1O60869 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.16■□□□□ 0.18
EDF1O60869 AL671277.2-201ENST00000458060 996 ntBASIC16.16■□□□□ 0.18
EDF1O60869 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.16■□□□□ 0.18
EDF1O60869 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 NTF6B-201ENST00000591913 560 ntBASIC16.16■□□□□ 0.18
EDF1O60869 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.16■□□□□ 0.18
EDF1O60869 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.16■□□□□ 0.18
EDF1O60869 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.16■□□□□ 0.18
EDF1O60869 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
EDF1O60869 NCF1C-201ENST00000438382 1427 ntBASIC16.16■□□□□ 0.18
EDF1O60869 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.16■□□□□ 0.18
EDF1O60869 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EDF1O60869 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.16■□□□□ 0.18
EDF1O60869 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 AC233702.3-201ENST00000578656 1387 ntBASIC16.15■□□□□ 0.18
EDF1O60869 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.15■□□□□ 0.18
EDF1O60869 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 AC087163.2-201ENST00000457299 853 ntBASIC16.15■□□□□ 0.18
EDF1O60869 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 LINC01238-205ENST00000567549 1107 ntBASIC16.15■□□□□ 0.18
EDF1O60869 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
EDF1O60869 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
EDF1O60869 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.15■□□□□ 0.18
EDF1O60869 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EDF1O60869 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
EDF1O60869 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
EDF1O60869 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms