Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.44□□□□□ -0.26
SSSCA1O60232 TERC-201ENST00000602385 541 ntBASIC13.44□□□□□ -0.26
SSSCA1O60232 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.44□□□□□ -0.26
SSSCA1O60232 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.44□□□□□ -0.26
SSSCA1O60232 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.44□□□□□ -0.26
SSSCA1O60232 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 PMPCAP1-201ENST00000508114 1576 ntBASIC13.44□□□□□ -0.26
SSSCA1O60232 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 AC069224.1-201ENST00000566372 1715 ntBASIC13.44□□□□□ -0.26
SSSCA1O60232 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.44□□□□□ -0.26
SSSCA1O60232 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSSCA1O60232 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 KRT8P39-201ENST00000396270 1433 ntBASIC13.43□□□□□ -0.26
SSSCA1O60232 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.43□□□□□ -0.26
SSSCA1O60232 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.43□□□□□ -0.26
SSSCA1O60232 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.43□□□□□ -0.26
SSSCA1O60232 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.43□□□□□ -0.26
SSSCA1O60232 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 TOP3BP1-201ENST00000420768 1380 ntBASIC13.43□□□□□ -0.26
SSSCA1O60232 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSSCA1O60232 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.43□□□□□ -0.26
SSSCA1O60232 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.43□□□□□ -0.26
SSSCA1O60232 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
SSSCA1O60232 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.42□□□□□ -0.26
SSSCA1O60232 TP73-AS1-210ENST00000637775 1455 ntBASIC13.42□□□□□ -0.26
SSSCA1O60232 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.42□□□□□ -0.26
SSSCA1O60232 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SSSCA1O60232 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.42□□□□□ -0.26
SSSCA1O60232 LINC01144-201ENST00000626198 1710 ntBASIC13.42□□□□□ -0.26
SSSCA1O60232 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSSCA1O60232 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms