Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 KRT17P6-201ENST00000453795 1220 ntBASIC14.31□□□□□ -0.12
SHISA3A0PJX4 BX005266.1-201ENST00000473402 457 ntBASIC14.31□□□□□ -0.12
SHISA3A0PJX4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 SLC25A6P2-201ENST00000497974 877 ntBASIC14.31□□□□□ -0.12
SHISA3A0PJX4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 RN7SL850P-201ENST00000579959 291 ntBASIC14.31□□□□□ -0.12
SHISA3A0PJX4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 AC090616.6-203ENST00000579186 1945 ntBASIC14.31□□□□□ -0.12
SHISA3A0PJX4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SHISA3A0PJX4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 PRYP5-201ENST00000451909 266 ntBASIC14.3□□□□□ -0.12
SHISA3A0PJX4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 AC022616.7-201ENST00000525383 220 ntBASIC14.3□□□□□ -0.12
SHISA3A0PJX4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 TPSP2-201ENST00000561760 610 ntBASIC14.3□□□□□ -0.12
SHISA3A0PJX4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 AC020765.3-201ENST00000613051 740 ntBASIC14.3□□□□□ -0.12
SHISA3A0PJX4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.3□□□□□ -0.12
SHISA3A0PJX4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AC112693.3-201ENST00000624819 1983 ntBASIC14.29□□□□□ -0.12
SHISA3A0PJX4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 AC105250.1-201ENST00000509378 2057 ntBASIC14.29□□□□□ -0.12
SHISA3A0PJX4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHISA3A0PJX4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms