Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.53■□□□□ 0.24
TCRBV9S1A1TA0A576 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 AC008677.1-201ENST00000519230 1561 ntBASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 FAM185BP-201ENST00000443595 716 ntBASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 IFNL4P1-201ENST00000607083 540 ntBASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.52■□□□□ 0.24
TCRBV9S1A1TA0A576 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 AP002414.3-201ENST00000589352 1468 ntBASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 AP003680.1-201ENST00000598970 3660 ntBASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TCRBV9S1A1TA0A576 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 FER1L4-210ENST00000615531 5998 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 HMGA1P7-201ENST00000406908 502 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 AC108073.2-201ENST00000464002 357 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 AC105339.3-201ENST00000560043 636 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 AC012640.2-201ENST00000561606 901 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 AC021097.1-201ENST00000607902 574 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 AC004790.2-201ENST00000623588 572 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 AC092919.2-201ENST00000623631 1645 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 PPT1-215ENST00000641471 2368 ntBASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms