Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 FAM220BP-201ENST00000377689 816 ntBASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 AL512638.1-201ENST00000457493 794 ntBASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHB2Q9Y5E7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 PCDHB19P-201ENST00000570871 2371 ntBASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 TSPY16P-201ENST00000449843 468 ntBASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 AC027369.6-201ENST00000525520 931 ntBASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 AC073592.8-201ENST00000624126 511 ntBASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB2Q9Y5E7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
PCDHB2Q9Y5E7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB2Q9Y5E7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB2Q9Y5E7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.89■□□□□ 0.46
PCDHB2Q9Y5E7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 AC241585.1-201ENST00000433527 519 ntBASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB2Q9Y5E7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms