Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 AC004233.3-201ENST00000607794 1269 ntBASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTDP1Q9Y5B0 AC026471.1-201ENST00000564629 3026 ntBASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTDP1Q9Y5B0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 MIR661-201ENST00000384842 89 ntBASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 AC015922.1-201ENST00000421102 1152 ntBASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 AC093724.1-201ENST00000448659 1027 ntBASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 AC027307.3-201ENST00000594262 1100 ntBASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTDP1Q9Y5B0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms