Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 RNF216P1-203ENST00000404404 2427 ntBASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 UBALD1-205ENST00000590891 2641 ntBASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 RN7SL692P-201ENST00000464677 288 ntBASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 AL132655.2-201ENST00000596276 594 ntBASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRG3Q9Y2Y8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 GNAQP1-201ENST00000444815 1067 ntBASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 HLA-J-202ENST00000469281 1241 ntBASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 AC104794.3-201ENST00000566840 1248 ntBASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 AL358472.5-202ENST00000641448 1267 ntBASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 AC007541.1-201ENST00000570282 1469 ntBASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PRG3Q9Y2Y8 NFIC-211ENST00000641145 8399 ntBASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 AC044860.1-202ENST00000559481 777 ntBASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 AL596325.1-201ENST00000563991 1082 ntBASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 AC010336.2-201ENST00000564226 506 ntBASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 AC026979.3-201ENST00000607315 403 ntBASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
PRG3Q9Y2Y8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms