Protein–RNA interactions for Protein: Q9P2E8

MARCH4, E3 ubiquitin-protein ligase MARCH4, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH4Q9P2E8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
MARCH4Q9P2E8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MARCH4Q9P2E8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MARCH4Q9P2E8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
MARCH4Q9P2E8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MARCH4Q9P2E8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MARCH4Q9P2E8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 U82695.1-201ENST00000635752 1889 ntBASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 AC022188.1-201ENST00000620960 1664 ntBASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 AL138918.1-201ENST00000568306 659 ntBASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 AL161645.1-201ENST00000622716 1255 ntBASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.31■□□□□ 0.2
MARCH4Q9P2E8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 AC112191.1-201ENST00000523689 701 ntBASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 AC092902.6-201ENST00000641783 218 ntBASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MARCH4Q9P2E8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
MARCH4Q9P2E8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms