Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 AC092933.1-201ENST00000393644 945 ntBASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 BCRP2-202ENST00000447763 634 ntBASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 POU5F1P6-201ENST00000466990 990 ntBASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 RPL13AP25-201ENST00000484130 612 ntBASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 BCRP6-201ENST00000510112 632 ntBASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 BCRP7-201ENST00000511549 544 ntBASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 NME6-203ENST00000415644 849 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 AC134915.1-201ENST00000426461 574 ntBASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 INTS4P2-202ENST00000614726 2019 ntBASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 AL592424.1-201ENST00000563624 1536 ntBASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC52A1Q9NWF4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 NME4-207ENST00000450036 985 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC52A1Q9NWF4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 FAM21FP-201ENST00000426241 1131 ntBASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC52A1Q9NWF4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC52A1Q9NWF4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms