Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42SE1Q9NRR8 API5-202ENST00000420461 2009 ntTSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 POU5F1P4-201ENST00000413175 1085 ntBASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
CDC42SE1Q9NRR8 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 AP002008.2-201ENST00000635926 4870 ntBASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 AC053503.5-201ENST00000601508 636 ntBASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 AC002310.6-201ENST00000624451 1377 ntBASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDC42SE1Q9NRR8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms