Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 HMGN1P19-201ENST00000436976 333 ntBASIC16.93■□□□□ 0.3
USP29Q9HBJ7 RHOQP3-201ENST00000437982 621 ntBASIC16.93■□□□□ 0.3
USP29Q9HBJ7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 MIR4469-201ENST00000583919 79 ntBASIC16.93■□□□□ 0.3
USP29Q9HBJ7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 AC010491.1-201ENST00000563101 2797 ntBASIC16.93■□□□□ 0.3
USP29Q9HBJ7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP29Q9HBJ7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 HTR5BP-201ENST00000430851 1154 ntBASIC16.92■□□□□ 0.3
USP29Q9HBJ7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 AC096734.2-201ENST00000562054 433 ntBASIC16.92■□□□□ 0.3
USP29Q9HBJ7 AL031055.1-201ENST00000606362 631 ntBASIC16.92■□□□□ 0.3
USP29Q9HBJ7 AC021097.1-201ENST00000607902 574 ntBASIC16.92■□□□□ 0.3
USP29Q9HBJ7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 KRT18P28-201ENST00000453838 1332 ntBASIC16.92■□□□□ 0.3
USP29Q9HBJ7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.92■□□□□ 0.3
USP29Q9HBJ7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 ACTG1P14-201ENST00000446382 1122 ntBASIC16.91■□□□□ 0.3
USP29Q9HBJ7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 AC092865.6-201ENST00000642101 219 ntBASIC16.91■□□□□ 0.3
USP29Q9HBJ7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 AL592424.1-201ENST00000563624 1536 ntBASIC16.91■□□□□ 0.3
USP29Q9HBJ7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.91■□□□□ 0.3
USP29Q9HBJ7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.9■□□□□ 0.3
USP29Q9HBJ7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.9■□□□□ 0.3
USP29Q9HBJ7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms