Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CNTNAP4Q9C0A0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AC134915.1-201ENST00000426461 574 ntBASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AC120045.2-201ENST00000567334 178 ntBASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 CLUHP6-201ENST00000580789 941 ntBASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CNTNAP4Q9C0A0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 AL355864.2-201ENST00000447420 863 ntBASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 AC099548.2-209ENST00000480264 625 ntBASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 RPL13AP25-201ENST00000484130 612 ntBASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 AC068880.1-201ENST00000507289 2297 ntBASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.33■□□□□ 0.85
CNTNAP4Q9C0A0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CNTNAP4Q9C0A0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 AL049840.4-201ENST00000602422 811 ntBASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CNTNAP4Q9C0A0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CNTNAP4Q9C0A0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms