Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
VGLL1Q99990 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.52□□□□□ -0.41
VGLL1Q99990 KRT18P35-201ENST00000510488 1269 ntBASIC12.52□□□□□ -0.41
VGLL1Q99990 AC106795.1-205ENST00000512851 1056 ntBASIC12.52□□□□□ -0.41
VGLL1Q99990 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.52□□□□□ -0.41
VGLL1Q99990 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.52□□□□□ -0.41
VGLL1Q99990 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.52□□□□□ -0.41
VGLL1Q99990 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.52□□□□□ -0.41
VGLL1Q99990 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.52□□□□□ -0.41
VGLL1Q99990 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.52□□□□□ -0.41
VGLL1Q99990 AL589182.2-201ENST00000619332 1049 ntBASIC12.52□□□□□ -0.41
VGLL1Q99990 AL358472.4-201ENST00000633140 710 ntBASIC12.52□□□□□ -0.41
VGLL1Q99990 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.52□□□□□ -0.41
VGLL1Q99990 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VGLL1Q99990 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.52□□□□□ -0.41
VGLL1Q99990 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
VGLL1Q99990 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.52□□□□□ -0.41
VGLL1Q99990 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
VGLL1Q99990 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VGLL1Q99990 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.52□□□□□ -0.41
VGLL1Q99990 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 REXO1L8P-201ENST00000604378 1897 ntBASIC12.51□□□□□ -0.41
VGLL1Q99990 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.51□□□□□ -0.41
VGLL1Q99990 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 ATP5G2P1-201ENST00000433580 426 ntBASIC12.51□□□□□ -0.41
VGLL1Q99990 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.51□□□□□ -0.41
VGLL1Q99990 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.51□□□□□ -0.41
VGLL1Q99990 AC087163.2-201ENST00000457299 853 ntBASIC12.51□□□□□ -0.41
VGLL1Q99990 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.51□□□□□ -0.41
VGLL1Q99990 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 AL732292.2-201ENST00000609649 430 ntBASIC12.51□□□□□ -0.41
VGLL1Q99990 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 AL139288.1-201ENST00000623748 933 ntBASIC12.51□□□□□ -0.41
VGLL1Q99990 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 NORAD-201ENST00000565493 5339 ntBASIC12.51□□□□□ -0.41
VGLL1Q99990 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 AC131009.4-201ENST00000624048 1740 ntBASIC12.51□□□□□ -0.41
VGLL1Q99990 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.51□□□□□ -0.41
VGLL1Q99990 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VGLL1Q99990 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VGLL1Q99990 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.5□□□□□ -0.41
VGLL1Q99990 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VGLL1Q99990 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms