Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.85□□□□□ -0.35
RAX2Q96IS3 FAM58DP-201ENST00000428076 619 ntBASIC12.85□□□□□ -0.35
RAX2Q96IS3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 AC016027.1-202ENST00000607927 1699 ntBASIC12.85□□□□□ -0.35
RAX2Q96IS3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.85□□□□□ -0.35
RAX2Q96IS3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAX2Q96IS3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 LINC01225-203ENST00000563550 1244 ntBASIC12.84□□□□□ -0.35
RAX2Q96IS3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.84□□□□□ -0.35
RAX2Q96IS3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAX2Q96IS3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.83□□□□□ -0.35
RAX2Q96IS3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
RAX2Q96IS3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.83□□□□□ -0.35
RAX2Q96IS3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
RAX2Q96IS3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RAX2Q96IS3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAX2Q96IS3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAX2Q96IS3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RAX2Q96IS3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.83□□□□□ -0.36
RAX2Q96IS3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAX2Q96IS3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAX2Q96IS3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAX2Q96IS3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAX2Q96IS3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms