Protein–RNA interactions for Protein: Q8WW12

PCNP, PEST proteolytic signal-containing nuclear protein, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPQ8WW12 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 KRT18P29-201ENST00000397031 1267 ntBASIC13.64□□□□□ -0.23
PCNPQ8WW12 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 AC008403.3-201ENST00000598924 454 ntBASIC13.64□□□□□ -0.23
PCNPQ8WW12 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 FAM197Y4-202ENST00000622692 608 ntBASIC13.64□□□□□ -0.23
PCNPQ8WW12 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.64□□□□□ -0.23
PCNPQ8WW12 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 KRT8P7-201ENST00000533003 1432 ntBASIC13.64□□□□□ -0.23
PCNPQ8WW12 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCNPQ8WW12 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 AL023875.1-201ENST00000640777 796 ntBASIC13.63□□□□□ -0.23
PCNPQ8WW12 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 REXO1L8P-201ENST00000604378 1897 ntBASIC13.63□□□□□ -0.23
PCNPQ8WW12 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PCNPQ8WW12 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.63□□□□□ -0.23
PCNPQ8WW12 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
PCNPQ8WW12 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.62□□□□□ -0.23
PCNPQ8WW12 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCNPQ8WW12 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PCNPQ8WW12 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNPQ8WW12 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PCNPQ8WW12 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNPQ8WW12 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNPQ8WW12 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PCNPQ8WW12 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PCNPQ8WW12 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms