Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 NORAD-201ENST00000565493 5339 ntBASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
DNAAF1Q8NEP3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 SNX33P1-201ENST00000592116 1762 ntBASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
DNAAF1Q8NEP3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 AL445228.2-201ENST00000605589 952 ntBASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.52□□□□□ -0.09
DNAAF1Q8NEP3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 BX005266.1-201ENST00000473402 457 ntBASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 NKAPP1-205ENST00000585790 367 ntBASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 AL139424.1-201ENST00000607572 797 ntBASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 AL121772.3-201ENST00000610840 674 ntBASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 AC093458.2-201ENST00000623150 629 ntBASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 AL512652.2-201ENST00000625156 1716 ntBASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
DNAAF1Q8NEP3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms