Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 GAPDHP21-201ENST00000450301 1010 ntBASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 AP002490.2-201ENST00000524791 560 ntBASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 GGTLC5P-201ENST00000617623 998 ntBASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 CYP2T1P-202ENST00000641596 2535 ntBASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC105Q8IYK2 HLA-A-202ENST00000376806 1854 ntBASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 DUX4L27-201ENST00000554796 1261 ntBASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 AL645728.1-201ENST00000366221 2101 ntBASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 AC092364.2-201ENST00000596710 2692 ntBASIC17.75■□□□□ 0.43
CCDC105Q8IYK2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AC236430.1-201ENST00000402231 743 ntBASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AC007274.1-201ENST00000439805 662 ntBASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AC002472.2-201ENST00000442739 958 ntBASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AC068137.2-201ENST00000605408 478 ntBASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AL353135.1-201ENST00000606729 504 ntBASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC105Q8IYK2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms