Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 AL662844.1-201ENST00000546340 181 ntBASIC15.21■□□□□ 0.03
VRK2Q86Y07 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.21■□□□□ 0.03
VRK2Q86Y07 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VRK2Q86Y07 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VRK2Q86Y07 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.21■□□□□ 0.02
VRK2Q86Y07 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VRK2Q86Y07 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VRK2Q86Y07 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
VRK2Q86Y07 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.21■□□□□ 0.02
VRK2Q86Y07 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.21■□□□□ 0.02
VRK2Q86Y07 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VRK2Q86Y07 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VRK2Q86Y07 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
VRK2Q86Y07 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VRK2Q86Y07 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 PMS2P4-201ENST00000412466 1052 ntBASIC15.2■□□□□ 0.02
VRK2Q86Y07 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 AC096734.2-201ENST00000562054 433 ntBASIC15.2■□□□□ 0.02
VRK2Q86Y07 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VRK2Q86Y07 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.2■□□□□ 0.02
VRK2Q86Y07 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VRK2Q86Y07 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.19■□□□□ 0.02
VRK2Q86Y07 TPM4P1-201ENST00000436100 807 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms