Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ME2P1-201ENST00000426028 1970 ntBASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 AC027796.2-201ENST00000575326 344 ntBASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 AC018529.1-201ENST00000613063 361 ntBASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 AC008677.1-201ENST00000519230 1561 ntBASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 AC084018.2-201ENST00000613093 2607 ntBASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM4Q86VH4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 TUBB3P1-201ENST00000405796 1332 ntBASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM4Q86VH4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 AC003101.2-201ENST00000612557 442 ntBASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM4Q86VH4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms