Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 PRAL-201ENST00000624952 3286 ntBASIC18.49■□□□□ 0.55
SHC4Q6S5L8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 AC007967.2-201ENST00000432613 625 ntBASIC18.49■□□□□ 0.55
SHC4Q6S5L8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC4Q6S5L8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 AC073439.1-201ENST00000624121 1774 ntBASIC18.48■□□□□ 0.55
SHC4Q6S5L8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.48■□□□□ 0.55
SHC4Q6S5L8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 IL9RP2-201ENST00000423948 1312 ntBASIC18.48■□□□□ 0.55
SHC4Q6S5L8 AC092384.3-202ENST00000564646 2873 ntBASIC18.48■□□□□ 0.55
SHC4Q6S5L8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SHC4Q6S5L8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 RPL13AP23-201ENST00000480739 586 ntBASIC18.47■□□□□ 0.55
SHC4Q6S5L8 KRT18P34-201ENST00000488218 1270 ntBASIC18.47■□□□□ 0.55
SHC4Q6S5L8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHC4Q6S5L8 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms