Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKAL1Q5VV42 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 SSR4P1-203ENST00000599569 2260 ntBASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 HAUS4P1-201ENST00000406739 1145 ntBASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 VN2R19P-201ENST00000442399 1052 ntBASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 AC092910.1-201ENST00000482027 1129 ntBASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 AC020658.6-201ENST00000623564 1870 ntBASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKAL1Q5VV42 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 HCG4B-203ENST00000450128 991 ntBASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 AC245100.5-201ENST00000452108 331 ntBASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 KRT18P56-201ENST00000507275 550 ntBASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 AL009183.1-201ENST00000603760 355 ntBASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.91■□□□□ 0.46
CDKAL1Q5VV42 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKAL1Q5VV42 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKAL1Q5VV42 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKAL1Q5VV42 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKAL1Q5VV42 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKAL1Q5VV42 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CDKAL1Q5VV42 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKAL1Q5VV42 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKAL1Q5VV42 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms