Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC006504.4-201ENST00000592118 1568 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 HLA-A-201ENST00000376802 1334 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 AL121894.2-201ENST00000602977 491 ntBASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 MIR1199-201ENST00000621445 119 ntBASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
ATPAF1Q5TC12 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 PTCHD3P3-201ENST00000403073 906 ntBASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 AC026396.1-201ENST00000419388 421 ntBASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 AC012640.2-201ENST00000561606 901 ntBASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 AL356488.2-201ENST00000602755 427 ntBASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 GGTLC5P-201ENST00000617623 998 ntBASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ATPAF1Q5TC12 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms