Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 AC073621.1-201ENST00000392730 636 ntBASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 AC092474.2-201ENST00000424288 719 ntBASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 AL078644.1-201ENST00000609881 752 ntBASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHRFAM7AQ494W8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHRFAM7AQ494W8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 SPCS2P1-201ENST00000561636 679 ntBASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 AC092865.6-201ENST00000642101 219 ntBASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHRFAM7AQ494W8 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms