Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.39■□□□□ 0.37
BRCC3P46736 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.39■□□□□ 0.37
BRCC3P46736 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.39■□□□□ 0.37
BRCC3P46736 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
BRCC3P46736 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BRCC3P46736 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
BRCC3P46736 AC011676.5-201ENST00000624864 2660 ntBASIC17.39■□□□□ 0.37
BRCC3P46736 U82695.1-201ENST00000635752 1889 ntBASIC17.39■□□□□ 0.37
BRCC3P46736 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRCC3P46736 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BRCC3P46736 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.38■□□□□ 0.37
BRCC3P46736 AC190387.1-201ENST00000551683 408 ntBASIC17.38■□□□□ 0.37
BRCC3P46736 AL512361.1-201ENST00000554200 418 ntBASIC17.38■□□□□ 0.37
BRCC3P46736 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 AF228730.6-201ENST00000641497 218 ntBASIC17.38■□□□□ 0.37
BRCC3P46736 AC084121.3-201ENST00000641716 218 ntBASIC17.38■□□□□ 0.37
BRCC3P46736 AC105233.6-201ENST00000642093 218 ntBASIC17.38■□□□□ 0.37
BRCC3P46736 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.38■□□□□ 0.37
BRCC3P46736 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
BRCC3P46736 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BRCC3P46736 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRCC3P46736 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BRCC3P46736 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
BRCC3P46736 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.37■□□□□ 0.37
BRCC3P46736 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.37■□□□□ 0.37
BRCC3P46736 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.37■□□□□ 0.37
BRCC3P46736 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BRCC3P46736 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.37■□□□□ 0.37
BRCC3P46736 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.37■□□□□ 0.37
BRCC3P46736 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.37■□□□□ 0.37
BRCC3P46736 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
BRCC3P46736 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.37■□□□□ 0.37
BRCC3P46736 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.37■□□□□ 0.37
BRCC3P46736 AC004840.1-201ENST00000636359 365 ntBASIC17.37■□□□□ 0.37
BRCC3P46736 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.37■□□□□ 0.37
BRCC3P46736 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.37■□□□□ 0.37
BRCC3P46736 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.37■□□□□ 0.37
BRCC3P46736 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.37■□□□□ 0.37
BRCC3P46736 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRCC3P46736 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BRCC3P46736 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
BRCC3P46736 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms