Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCK1P35558 AC005052.1-201ENST00000625181 2492 ntBASIC17.36■□□□□ 0.37
PCK1P35558 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCK1P35558 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 PCGF3-213ENST00000620529 1899 ntBASIC17.35■□□□□ 0.37
PCK1P35558 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCK1P35558 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.35■□□□□ 0.37
PCK1P35558 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.35■□□□□ 0.37
PCK1P35558 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
PCK1P35558 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 RNU1-129P-201ENST00000384064 167 ntBASIC17.35■□□□□ 0.37
PCK1P35558 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.35■□□□□ 0.37
PCK1P35558 U1.21-201ENST00000580816 167 ntBASIC17.35■□□□□ 0.37
PCK1P35558 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.35■□□□□ 0.37
PCK1P35558 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.35■□□□□ 0.37
PCK1P35558 AC020765.3-201ENST00000613051 740 ntBASIC17.35■□□□□ 0.37
PCK1P35558 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.35■□□□□ 0.37
PCK1P35558 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PCK1P35558 AL662844.4-201ENST00000606367 2838 ntBASIC17.35■□□□□ 0.37
PCK1P35558 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.35■□□□□ 0.37
PCK1P35558 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.35■□□□□ 0.37
PCK1P35558 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCK1P35558 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCK1P35558 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PCK1P35558 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.34■□□□□ 0.37
PCK1P35558 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.34■□□□□ 0.37
PCK1P35558 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.34■□□□□ 0.37
PCK1P35558 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PCK1P35558 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.34■□□□□ 0.37
PCK1P35558 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.34■□□□□ 0.37
PCK1P35558 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCK1P35558 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCK1P35558 FDX1P1-201ENST00000449115 551 ntBASIC17.34■□□□□ 0.37
PCK1P35558 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.34■□□□□ 0.37
PCK1P35558 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.34■□□□□ 0.37
PCK1P35558 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.34■□□□□ 0.37
PCK1P35558 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
PCK1P35558 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.34■□□□□ 0.37
PCK1P35558 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.34■□□□□ 0.37
PCK1P35558 AC010507.1-201ENST00000633895 436 ntBASIC17.34■□□□□ 0.37
PCK1P35558 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.34■□□□□ 0.37
PCK1P35558 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCK1P35558 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.34■□□□□ 0.37
PCK1P35558 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCK1P35558 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCK1P35558 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCK1P35558 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PCK1P35558 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCK1P35558 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCK1P35558 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.33■□□□□ 0.37
PCK1P35558 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.33■□□□□ 0.37
PCK1P35558 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCK1P35558 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.33■□□□□ 0.37
PCK1P35558 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PCK1P35558 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms