Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 AC112504.1-201ENST00000623415 1841 ntBASIC12.14□□□□□ -0.47
CKS2P33552 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.14□□□□□ -0.47
CKS2P33552 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.14□□□□□ -0.47
CKS2P33552 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.14□□□□□ -0.47
CKS2P33552 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.14□□□□□ -0.47
CKS2P33552 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CKS2P33552 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 AC005332.3-201ENST00000589904 676 ntBASIC12.14□□□□□ -0.47
CKS2P33552 Z99916.2-201ENST00000604037 246 ntBASIC12.14□□□□□ -0.47
CKS2P33552 FAM87A-204ENST00000613235 858 ntBASIC12.14□□□□□ -0.47
CKS2P33552 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CKS2P33552 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.14□□□□□ -0.47
CKS2P33552 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
CKS2P33552 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CKS2P33552 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
CKS2P33552 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.14□□□□□ -0.47
CKS2P33552 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CKS2P33552 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.13□□□□□ -0.47
CKS2P33552 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.13□□□□□ -0.47
CKS2P33552 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
CKS2P33552 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.13□□□□□ -0.47
CKS2P33552 FAM201B-201ENST00000458407 597 ntBASIC12.13□□□□□ -0.47
CKS2P33552 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.13□□□□□ -0.47
CKS2P33552 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.13□□□□□ -0.47
CKS2P33552 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CKS2P33552 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms