Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.12□□□□□ -0.15
CD40P25942 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CD40P25942 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 AC241585.1-201ENST00000433527 519 ntBASIC14.12□□□□□ -0.15
CD40P25942 MTND6P24-201ENST00000440466 518 ntBASIC14.12□□□□□ -0.15
CD40P25942 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40P25942 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.12□□□□□ -0.15
CD40P25942 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CD40P25942 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.12□□□□□ -0.15
CD40P25942 AC105021.1-202ENST00000570572 669 ntBASIC14.12□□□□□ -0.15
CD40P25942 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40P25942 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.12□□□□□ -0.15
CD40P25942 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.12□□□□□ -0.15
CD40P25942 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.12□□□□□ -0.15
CD40P25942 SPDYE12P-201ENST00000618416 771 ntBASIC14.12□□□□□ -0.15
CD40P25942 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40P25942 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40P25942 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CD40P25942 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CD40P25942 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.12□□□□□ -0.15
CD40P25942 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CD40P25942 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 AC005622.1-201ENST00000636801 1703 ntBASIC14.12□□□□□ -0.15
CD40P25942 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.12□□□□□ -0.15
CD40P25942 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CD40P25942 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CD40P25942 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CD40P25942 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.11□□□□□ -0.15
CD40P25942 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.11□□□□□ -0.15
CD40P25942 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 AC080080.1-201ENST00000625121 2420 ntBASIC14.11□□□□□ -0.15
CD40P25942 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 HLA-V-204ENST00000476601 1289 ntBASIC14.11□□□□□ -0.15
CD40P25942 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.11□□□□□ -0.15
CD40P25942 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.11□□□□□ -0.15
CD40P25942 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.11□□□□□ -0.15
CD40P25942 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.11□□□□□ -0.15
CD40P25942 MIR4745-201ENST00000577608 62 ntBASIC14.11□□□□□ -0.15
CD40P25942 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 RN7SL828P-201ENST00000607615 303 ntBASIC14.11□□□□□ -0.15
CD40P25942 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 AC106886.4-201ENST00000623557 2502 ntBASIC14.11□□□□□ -0.15
CD40P25942 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CD40P25942 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms