Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.88□□□□□ -0.19
COL8A2P25067 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
COL8A2P25067 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL8A2P25067 RNF216P1-203ENST00000404404 2427 ntBASIC13.88□□□□□ -0.19
COL8A2P25067 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.88□□□□□ -0.19
COL8A2P25067 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.87□□□□□ -0.19
COL8A2P25067 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.87□□□□□ -0.19
COL8A2P25067 FO538757.1-201ENST00000623083 1397 ntBASIC13.87□□□□□ -0.19
COL8A2P25067 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.87□□□□□ -0.19
COL8A2P25067 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 AC132872.4-202ENST00000622924 2756 ntBASIC13.87□□□□□ -0.19
COL8A2P25067 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.87□□□□□ -0.19
COL8A2P25067 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.87□□□□□ -0.19
COL8A2P25067 FAM8A3P-201ENST00000427218 844 ntBASIC13.87□□□□□ -0.19
COL8A2P25067 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.87□□□□□ -0.19
COL8A2P25067 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.87□□□□□ -0.19
COL8A2P25067 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.87□□□□□ -0.19
COL8A2P25067 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.87□□□□□ -0.19
COL8A2P25067 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.87□□□□□ -0.19
COL8A2P25067 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.87□□□□□ -0.19
COL8A2P25067 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
COL8A2P25067 AC140878.1-201ENST00000565277 250 ntBASIC13.87□□□□□ -0.19
COL8A2P25067 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.87□□□□□ -0.19
COL8A2P25067 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.87□□□□□ -0.19
COL8A2P25067 AL096865.1-201ENST00000606796 927 ntBASIC13.87□□□□□ -0.19
COL8A2P25067 AC018529.1-201ENST00000613063 361 ntBASIC13.87□□□□□ -0.19
COL8A2P25067 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.87□□□□□ -0.19
COL8A2P25067 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.87□□□□□ -0.19
COL8A2P25067 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
COL8A2P25067 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.87□□□□□ -0.19
COL8A2P25067 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 AL031731.1-201ENST00000642131 2094 ntBASIC13.87□□□□□ -0.19
COL8A2P25067 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.87□□□□□ -0.19
COL8A2P25067 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.87□□□□□ -0.19
COL8A2P25067 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.87□□□□□ -0.19
COL8A2P25067 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
COL8A2P25067 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL8A2P25067 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.87□□□□□ -0.19
COL8A2P25067 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.86□□□□□ -0.19
COL8A2P25067 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
COL8A2P25067 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
COL8A2P25067 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.86□□□□□ -0.19
COL8A2P25067 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.86□□□□□ -0.19
COL8A2P25067 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
COL8A2P25067 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.86□□□□□ -0.19
COL8A2P25067 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 BCRP1-201ENST00000444246 691 ntBASIC13.86□□□□□ -0.19
COL8A2P25067 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.86□□□□□ -0.19
COL8A2P25067 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.86□□□□□ -0.19
COL8A2P25067 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.86□□□□□ -0.19
COL8A2P25067 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.86□□□□□ -0.19
COL8A2P25067 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL8A2P25067 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 AC006538.1-201ENST00000567905 1585 ntBASIC13.86□□□□□ -0.19
COL8A2P25067 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.86□□□□□ -0.19
COL8A2P25067 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
COL8A2P25067 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms