Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.42■□□□□ 0.06
CHMP24386 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHMP24386 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHMP24386 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CHMP24386 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.42■□□□□ 0.06
CHMP24386 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHMP24386 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHMP24386 AC129492.6-201ENST00000611383 1305 ntBASIC15.42■□□□□ 0.06
CHMP24386 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.42■□□□□ 0.06
CHMP24386 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CHMP24386 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 BX842568.4-201ENST00000421222 227 ntBASIC15.41■□□□□ 0.06
CHMP24386 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.41■□□□□ 0.06
CHMP24386 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 OR7E47P-204ENST00000575924 449 ntBASIC15.41■□□□□ 0.06
CHMP24386 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.41■□□□□ 0.06
CHMP24386 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.41■□□□□ 0.06
CHMP24386 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.41■□□□□ 0.06
CHMP24386 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.41■□□□□ 0.06
CHMP24386 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.41■□□□□ 0.06
CHMP24386 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHMP24386 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CHMP24386 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.4■□□□□ 0.06
CHMP24386 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.4■□□□□ 0.06
CHMP24386 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CHMP24386 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CHMP24386 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CHMP24386 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.4■□□□□ 0.06
CHMP24386 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.4■□□□□ 0.06
CHMP24386 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CHMP24386 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 DNAJB3-201ENST00000446806 729 ntBASIC15.4■□□□□ 0.06
CHMP24386 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.4■□□□□ 0.06
CHMP24386 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.4■□□□□ 0.06
CHMP24386 AC006538.3-201ENST00000612495 578 ntBASIC15.4■□□□□ 0.06
CHMP24386 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.4■□□□□ 0.06
CHMP24386 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 AL596087.1-201ENST00000400979 1969 ntBASIC15.4■□□□□ 0.06
CHMP24386 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 AC104640.1-201ENST00000562617 2109 ntBASIC15.4■□□□□ 0.06
CHMP24386 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.4■□□□□ 0.06
CHMP24386 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CHMP24386 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms