Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
CD3DP04234 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.98□□□□□ -0.17
CD3DP04234 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.98□□□□□ -0.17
CD3DP04234 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.98□□□□□ -0.17
CD3DP04234 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD3DP04234 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.98□□□□□ -0.17
CD3DP04234 MIR4492-201ENST00000581627 80 ntBASIC13.98□□□□□ -0.17
CD3DP04234 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.98□□□□□ -0.17
CD3DP04234 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.98□□□□□ -0.17
CD3DP04234 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CD3DP04234 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.98□□□□□ -0.17
CD3DP04234 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.98□□□□□ -0.17
CD3DP04234 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.98□□□□□ -0.17
CD3DP04234 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.98□□□□□ -0.17
CD3DP04234 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CD3DP04234 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD3DP04234 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD3DP04234 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD3DP04234 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CD3DP04234 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD3DP04234 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD3DP04234 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CD3DP04234 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CD3DP04234 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD3DP04234 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD3DP04234 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CD3DP04234 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 AL590787.1-201ENST00000568856 1315 ntBASIC13.97□□□□□ -0.17
CD3DP04234 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.97□□□□□ -0.17
CD3DP04234 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.97□□□□□ -0.17
CD3DP04234 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 AL645929.1-201ENST00000420084 975 ntBASIC13.97□□□□□ -0.17
CD3DP04234 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.97□□□□□ -0.17
CD3DP04234 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CD3DP04234 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.97□□□□□ -0.17
CD3DP04234 MPDU1-223ENST00000582151 728 ntBASIC13.97□□□□□ -0.17
CD3DP04234 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 AC010654.1-201ENST00000615722 808 ntBASIC13.97□□□□□ -0.17
CD3DP04234 SNX18-202ENST00000343017 3140 ntBASIC13.97□□□□□ -0.17
CD3DP04234 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 AL161772.1-201ENST00000610494 4412 ntBASIC13.97□□□□□ -0.17
CD3DP04234 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CD3DP04234 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.97□□□□□ -0.17
CD3DP04234 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD3DP04234 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.97□□□□□ -0.17
CD3DP04234 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.97□□□□□ -0.17
CD3DP04234 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CD3DP04234 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.96□□□□□ -0.17
CD3DP04234 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.96□□□□□ -0.17
CD3DP04234 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CD3DP04234 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CD3DP04234 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CD3DP04234 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.96□□□□□ -0.17
CD3DP04234 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
CD3DP04234 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD3DP04234 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.96□□□□□ -0.17
CD3DP04234 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms