Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA3O95167 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NDUFA3O95167 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NDUFA3O95167 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA3O95167 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.14□□□□□ -0.31
NDUFA3O95167 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 FAM58CP-201ENST00000435741 640 ntBASIC13.14□□□□□ -0.31
NDUFA3O95167 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA3O95167 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.14□□□□□ -0.31
NDUFA3O95167 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA3O95167 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NDUFA3O95167 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 MTDHP5-201ENST00000598980 586 ntBASIC13.14□□□□□ -0.31
NDUFA3O95167 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.14□□□□□ -0.31
NDUFA3O95167 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
NDUFA3O95167 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA3O95167 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.14□□□□□ -0.31
NDUFA3O95167 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.14□□□□□ -0.31
NDUFA3O95167 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.14□□□□□ -0.31
NDUFA3O95167 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.14□□□□□ -0.31
NDUFA3O95167 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
NDUFA3O95167 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NDUFA3O95167 AKAP8P1-201ENST00000434743 1349 ntBASIC13.13□□□□□ -0.31
NDUFA3O95167 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA3O95167 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NDUFA3O95167 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA3O95167 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA3O95167 AL355306.1-201ENST00000415580 579 ntBASIC13.13□□□□□ -0.31
NDUFA3O95167 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA3O95167 MKNK2P1-201ENST00000437526 628 ntBASIC13.13□□□□□ -0.31
NDUFA3O95167 AC093724.1-201ENST00000448659 1027 ntBASIC13.13□□□□□ -0.31
NDUFA3O95167 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA3O95167 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
NDUFA3O95167 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.13□□□□□ -0.31
NDUFA3O95167 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.13□□□□□ -0.31
NDUFA3O95167 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.13□□□□□ -0.31
NDUFA3O95167 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.13□□□□□ -0.31
NDUFA3O95167 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.13□□□□□ -0.31
NDUFA3O95167 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
NDUFA3O95167 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
NDUFA3O95167 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
NDUFA3O95167 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
NDUFA3O95167 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NDUFA3O95167 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDUFA3O95167 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA3O95167 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.12□□□□□ -0.31
NDUFA3O95167 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA3O95167 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDUFA3O95167 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms