Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
SUPT3HO75486 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SUPT3HO75486 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.38■□□□□ 0.21
SUPT3HO75486 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUPT3HO75486 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SUPT3HO75486 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUPT3HO75486 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUPT3HO75486 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.38■□□□□ 0.21
SUPT3HO75486 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUPT3HO75486 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUPT3HO75486 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SUPT3HO75486 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.37■□□□□ 0.21
SUPT3HO75486 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.37■□□□□ 0.21
SUPT3HO75486 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.37■□□□□ 0.21
SUPT3HO75486 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SUPT3HO75486 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.37■□□□□ 0.21
SUPT3HO75486 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.37■□□□□ 0.21
SUPT3HO75486 AC087641.1-201ENST00000557561 1021 ntBASIC16.37■□□□□ 0.21
SUPT3HO75486 AC008735.5-201ENST00000623544 497 ntBASIC16.37■□□□□ 0.21
SUPT3HO75486 AP001350.2-201ENST00000625104 1094 ntBASIC16.37■□□□□ 0.21
SUPT3HO75486 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.37■□□□□ 0.21
SUPT3HO75486 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 MTHFR-217ENST00000641820 1569 ntBASIC16.37■□□□□ 0.21
SUPT3HO75486 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SUPT3HO75486 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.37■□□□□ 0.21
SUPT3HO75486 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SUPT3HO75486 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SUPT3HO75486 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
SUPT3HO75486 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 FAM197Y8-203ENST00000450145 560 ntBASIC16.36■□□□□ 0.21
SUPT3HO75486 EMBP1-201ENST00000458200 901 ntBASIC16.36■□□□□ 0.21
SUPT3HO75486 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.36■□□□□ 0.21
SUPT3HO75486 AC005412.3-201ENST00000580309 715 ntBASIC16.36■□□□□ 0.21
SUPT3HO75486 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.36■□□□□ 0.21
SUPT3HO75486 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 AL356488.2-201ENST00000602755 427 ntBASIC16.36■□□□□ 0.21
SUPT3HO75486 AC008667.4-201ENST00000607370 168 ntBASIC16.36■□□□□ 0.21
SUPT3HO75486 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.36■□□□□ 0.21
SUPT3HO75486 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 AC129492.6-201ENST00000611383 1305 ntBASIC16.36■□□□□ 0.21
SUPT3HO75486 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SUPT3HO75486 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.36■□□□□ 0.21
SUPT3HO75486 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SUPT3HO75486 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms