Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 IGHV3-42-201ENST00000520410 361 ntBASIC15.88■□□□□ 0.13
SLC28A2O43868 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC28A2O43868 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A2O43868 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC28A2O43868 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC28A2O43868 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SLC28A2O43868 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC28A2O43868 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SLC28A2O43868 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC28A2O43868 AL021920.2-201ENST00000624828 1351 ntBASIC15.87■□□□□ 0.13
SLC28A2O43868 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC28A2O43868 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A2O43868 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC28A2O43868 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 AL512638.1-201ENST00000457493 794 ntBASIC15.87■□□□□ 0.13
SLC28A2O43868 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC28A2O43868 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC28A2O43868 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A2O43868 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC28A2O43868 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC28A2O43868 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC28A2O43868 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC28A2O43868 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 AL645728.1-201ENST00000366221 2101 ntBASIC15.86■□□□□ 0.13
SLC28A2O43868 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.86■□□□□ 0.13
SLC28A2O43868 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC28A2O43868 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC28A2O43868 AC018695.7-201ENST00000624587 2492 ntBASIC15.86■□□□□ 0.13
SLC28A2O43868 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC28A2O43868 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
SLC28A2O43868 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SLC28A2O43868 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.86■□□□□ 0.13
SLC28A2O43868 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC28A2O43868 CRB3P1-201ENST00000449338 276 ntBASIC15.86■□□□□ 0.13
SLC28A2O43868 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SLC28A2O43868 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC28A2O43868 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SLC28A2O43868 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC28A2O43868 AL805961.1-202ENST00000641562 540 ntBASIC15.86■□□□□ 0.13
SLC28A2O43868 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 TUBB3P1-201ENST00000405796 1332 ntBASIC15.86■□□□□ 0.13
SLC28A2O43868 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SLC28A2O43868 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms