Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM38O00635 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM38O00635 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM38O00635 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM38O00635 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM38O00635 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM38O00635 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM38O00635 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM38O00635 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM38O00635 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM38O00635 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM38O00635 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM38O00635 FAM58DP-201ENST00000428076 619 ntBASIC16.56■□□□□ 0.24
TRIM38O00635 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM38O00635 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM38O00635 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM38O00635 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM38O00635 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM38O00635 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.56■□□□□ 0.24
TRIM38O00635 AC015911.4-201ENST00000588022 1070 ntBASIC16.56■□□□□ 0.24
TRIM38O00635 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM38O00635 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRIM38O00635 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRIM38O00635 AL662844.4-201ENST00000606367 2838 ntBASIC16.56■□□□□ 0.24
TRIM38O00635 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 NFIC-211ENST00000641145 8399 ntBASIC16.56■□□□□ 0.24
TRIM38O00635 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
TRIM38O00635 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM38O00635 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM38O00635 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM38O00635 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 HMGA1P7-201ENST00000406908 502 ntBASIC16.55■□□□□ 0.24
TRIM38O00635 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM38O00635 COX20P2-201ENST00000452636 358 ntBASIC16.55■□□□□ 0.24
TRIM38O00635 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM38O00635 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM38O00635 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.55■□□□□ 0.24
TRIM38O00635 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM38O00635 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.55■□□□□ 0.24
TRIM38O00635 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM38O00635 DUX4L17-201ENST00000557360 1267 ntBASIC16.55■□□□□ 0.24
TRIM38O00635 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM38O00635 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM38O00635 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM38O00635 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM38O00635 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TRIM38O00635 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM38O00635 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRIM38O00635 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TRIM38O00635 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM38O00635 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM38O00635 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms