Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 AC120498.8-201ENST00000614275 531 ntBASIC16.15■□□□□ 0.18
VGLL3A8MV65 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.15■□□□□ 0.18
VGLL3A8MV65 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.15■□□□□ 0.18
VGLL3A8MV65 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
VGLL3A8MV65 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
VGLL3A8MV65 HSPA7-201ENST00000445535 1927 ntBASIC16.15■□□□□ 0.18
VGLL3A8MV65 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
VGLL3A8MV65 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.15■□□□□ 0.18
VGLL3A8MV65 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VGLL3A8MV65 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
VGLL3A8MV65 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC16.14■□□□□ 0.18
VGLL3A8MV65 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 KRT8P9-201ENST00000558927 1449 ntBASIC16.14■□□□□ 0.17
VGLL3A8MV65 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 HLA-G-202ENST00000376815 851 ntBASIC16.14■□□□□ 0.17
VGLL3A8MV65 HLA-G-203ENST00000376818 1127 ntBASIC16.14■□□□□ 0.17
VGLL3A8MV65 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
VGLL3A8MV65 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
VGLL3A8MV65 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 AC069544.1-201ENST00000609399 999 ntBASIC16.13■□□□□ 0.17
VGLL3A8MV65 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.13■□□□□ 0.17
VGLL3A8MV65 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VGLL3A8MV65 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms