Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 LINC01144-201ENST00000626198 1710 ntBASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 KRT8P48-201ENST00000515599 1220 ntBASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 FAM86C2P-203ENST00000528684 1004 ntBASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTPDC1A2A3K4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 TFAMP1-201ENST00000412727 736 ntBASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 AC023141.5-201ENST00000458585 616 ntBASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 AL031055.1-201ENST00000606362 631 ntBASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 AL596087.1-201ENST00000400979 1969 ntBASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPDC1A2A3K4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 AL009183.1-201ENST00000603760 355 ntBASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 CROCCP1-201ENST00000426910 5675 ntBASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 AC006449.6-201ENST00000612330 2296 ntBASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPDC1A2A3K4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTPDC1A2A3K4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms